现在是:
 

唐海宝(兼职教授)


  发布时间: 2016-01-11  信息员:  

唐海宝,教授,博士生导师,福建省“百人计划”专家。200912月获得美国佐治亚大学(University of Georgia)植物学博士学位。在古生物基因组学、比较基因组、数据库开发等研究领域取得优异的成绩,是基因组序列装配、基因注释、数据库建设、基因组比较分析方面的专家。先后在《Science》、《Nature》、《PNAS》、《Nature Genetics》、《The Plant Cell 》、《Genome Research》等国际学术期刊发表文章39篇。现为The University of Arizona资深科学家,福建农林大学海外引进人才,福建农林大学博士生导师。


主要研究方向:

1.多倍体基因组组成、基因互作和调控网络的进化模式;

2.作物基因组内受人工选择的遗传位点;

3.计算生物学方法、分析平台和数据库的开发和应用。

电子邮箱:tanghaibao@gmail.com


专利

Paterson A,  Tang, H. SORGHUM GRAIN SHATTERING GENE AND USES THEREOF IN ALTERING SEED  DISPERSAL (高粱脱粒基因). WO Patent  2,013,006,861


代表论文(Google  Scholar)

39)  Paterson, AH, …, Tang, H, …, Schmutz, J (2012) Repeated polyploidization of  Gossypium genomes and the evolution of spinnable cotton fibres. Nature,  doi:10.1038/nature11798.

38) Lee, TH, Tang, H, Wang, X, Paterson, AH (2012)  PGDD: a database of gene and genome duplication in plants. Nucleic Acids  Research, 1–7, doi:10.1093/nar/gks1104
  36) Tang, H, Lyons, E (2012) The  Evolution of Genome Structure. Int J Evol, 1:1 (Editorial)

35) Lu, J,  Peatman, E, Tang, H, Lewis, J, Liu, Z (2012) Profiling of gene duplication  patterns of sequenced teleost genomes: evidence for rapid lineage-specific  genome expansionmediated by recent tandem duplications. BMC Genomics, 13:  246.

34) Sato, S, …, Tang, H, …, Klein Lankhorst, RM (2012) The tomato  genome sequence provides insights into fleshy fruit evolution.Nature, 485:  635-641.

33) Tang, H, Woodhouse, MR, Cheng, F, Schnable, JC, Pedersen, BS,  et al. (2012) Altered patterns of fractionation and exon deletions in Brassica  rapa support a two-step model of paleohexaploidy. Genetics, 190:1563-1574 (First  Author).

32) Wang, Y*, Tang, H*, Debarry, JD, Tan, X, Li, J, et al. (2012)  MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and  collinearity. Nucleic Acids Research, 40: e49 (co-First Author).

31)  Woodhouse, MR, Tang, H, Freeling, M. (2011) Different gene families in  Arabidopsis thaliana transposed in different epochs and at different  frequencies throughout the rosids. Plant cell, 23: 4241-4253.

30) Wang, Y,  Wang, X, Tang, H, Tan, X, Ficklin, SP, et al. (2011) Modes of Gene Duplication  Contribute Differently to genetic novelty and redundancy, but show parallels  across divergent angiosperms. PLoS One, 6: e28150.

29) Young, ND, …, Tang,  H, …, Roe, B (2011) The medicago genome provides insight into the evolution of  rhizobial symbioses. Nature, 480: 520-524.

28) Wang, X, …, Tang, H, …,  Zhang, Z (2011) The genome of the mesopolyploid crop species Brassica rapa.  Nature Genetics, 43: 1035-1039.

27) Zuccolo, A, …, Tang, H, …,  Leebens-Mack, J (2011) A physical map for the Amborella trichopoda genome sheds  light on the evolution of angiosperm genome structure. Genome Biology, 12:  R48.

26) Ratnaparkhe, MB, …, Tang, H, …, Paterson, AH (2011) Comparative  analysis of peanut NBSLRR gene clusters suggests evolutionary innovation among  duplicated domains and erosion of gene microsynteny. New Phytologist, 192:  164-178.

25) Lin, L, Tang, H, Compton, RO, Lemke, C, Rainville, LK, et al.  (2011) Comparative analysis of Gossypium and Vitis genomes indicates genome  duplication specific to the Gossypium lineage. Genomics, 97: 313-320.

24)  Pedersen, BS, Tang, H, Freeling, M (2011) Gobe: an interactive, web-based tool  for comparative genomic visualization.Bioinformatics, 27(7):1015-6.

23)  Wang, X, Tang, H, Paterson, AH (2011) Seventy million years of concerted  evolution of a homoeologous chromosome pair, in parallel, in major Poaceae  lineages. Plant Cell, 23(1):27-37.

22) Tang, H, Lyons E, Pedersen B,  Schnable JC, Paterson AH, Freeling M (2011) Screening synteny blocks in pairwise  genome comparisons through integer programming. BMC Bioinformatics, 12: 102  (First Author).

21) Tang, H, Sezen, U, and Paterson, AH (2010)  Domestication and plant genomes. Current Opinion in Plant Biology,  13(2):160-6(First Author).

20) Tang, H, Bowers, JE, Wang, X, and Paterson,  AH (2010) Angiosperm genome comparisons reveal early polyploidy in the monocot  lineage. PNAS, 107(1): 472-7 (First Author).

19) Lin, L, …, Tang, H, …,  Paterson, AH (2010) A draft physical map of a D-genome cotton species (Gossypium  raimondii). BMC Genomics, 11(1):395. 

18) Paterson, AH, Freeling, M, Tang,  H, Wang, X (2010) Insights from the comparison of plant genome sequences. Annual  Review of Plant Biology, 61: 349-72.

17) Wang, J, …, Tang, H, …, Ming R  (2010) Microcollinearity between autopolyploid sugarcane and diploid sorghum  genomes. BMC Genomics, 11(1): 261.

16) Li, G, Ma, Q, Tang, H, Paterson, AH  and Xu, Y (2009) QUBIC: a qualitative biclustering algorithm for analyses of  gene expression data. Nucleic Acid Research, 37: e101.

15) Charles, M,  Tang, H, Belcram H, Paterson A, Gornicki P, et al. (2009) Sixty million years in  evolution of soft grain trait in grasses: emergence of the softness locus in the  common ancestor of Pooideae and Ehrhartoideae, after their divergence from  Panicoideae. Molecular Biology and Evolution, 26: 1651-1661.

14) Wang, X,  Tang, H, Bowers, JE, Paterson, AH (2009) Comparative inference of illegitimate  recombination between rice and sorghum duplicated genes produced by  polyploidization. Genome Research, 19: 1026-1032.

13) Paterson, AH, Bowers,  JE, Feltus, FA, Tang, H, Lin, L, Wang, X (2009) Comparative genomics of the  grasses: Promising a bountiful harvest. Plant Physiology, 149, 125-131.

12)  Paterson, AH, …, Tang, H, …, Rokhsar, DS (2009) The Sorghum bicolor genome and  the diversification of grasses. Nature, 457, 551-556.

11) Wang, X, Gowik,  U, Tang, H, Bowers, JE, Westhoff, P, Paterson, AH (2009) Comparative genomic  analysis of C4 photosynthetic pathway evolution in grasses. Genome Biology, 10:  R68.

10) Kim, C, Tang, H and Paterson, AH (2009) Duplication and Divergence  of Grass Genomes: Integrating the Chloridoids. Tropical Plant Biology, 2,  51-62.

9) Che, D, Tang, H and Song, Y (2009) Haplotype inference using a  genetic algorithm. Proceedings of IEEE Bioinformatics and Computational Biology,  31-37.

8) Lyons, E, …, Tang, H, …, Freeling, M (2008) Finding and Comparing  Syntenic Regions among Arabidopsis and the Outgroups Papaya, Poplar, and Grape:  CoGe with Rosids. Plant Physiology, 148, 1772-81.

7) Jang, CS, Kamps, TL,  Tang, H, Bowers, JE, Lemke, C, Paterson, AH (2008) Evolutionary fate of  rhizome-specific genes in a non-rhizomatous Sorghum genotype. Heredity 102:  266-273.

6) Tang H, Bowers JE, Wang X, Ming R, Alam M, Paterson AH (2008)  Synteny and Collinearity in Plant Genomes, Science, 320, 486-488 (First  Author).

5) Tang H, Wang X, Bowers JE, Ming R, Alam M, Paterson AH (2008)  Unraveling ancient hexaploidy through multiply-aligned angiosperm gene maps,  Genome Research, 18, 1944-1954 (First Author).

4) Ming, R, ..., Tang, H, …,  Alam M (2008) The draft genome of the transgenic tropical fruit tree papaya  (Carica papaya Linnaeus),Nature, 452, 991-996.

3) Wang, X, Tang, H, Bowers,  JE, Feltus, FA, Paterson, AH (2007) Extensive concerted evolution of rice  paralogs and the road to regaining independence, Genetics, 177,  1753-1763.

2) Liu, Q, Ge, S, Tang, H, Zhang, X, Zhu, G, Lu, BR (2006)  Phylogenetic relationships in Elymus (Poaceae: Triticeae) based on the nuclear  ribosomal internal transcribed spacer and chloroplast trnL-F sequences, New  Phytologist, 170, 411-420.

1) Bowers, JE, …, Tang, H, Wing, RA, Paterson,  AH. (2005) Comparative physical mapping links conservation of microsynteny to  chromosome structure and recombination in grasses, PNAS, 102,  13206-13211


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