现在是:
 

张积森


  发布时间: 2016-01-11  信息员:  

张积森,男,汉族,博士,教授(海峡联合研究院特聘),博士生导师,福建农林大学基因组与生物技术研究中心常务副主任。海外归国留学人员,福建省十四届青年科技奖获得者,福建省高校“新世纪优秀人才支持计划”入选者,福建农林大学海峡联合研究院学术委员会委员,福建农林大学海峡联合研究院教授委员会委员,福建省生化与分子生物学学会常务理事,国家自然科学基金函评专家,福建师范大学优秀青年骨干教师,福建农林大学优秀教师。主要从事以甘蔗、食用菌、龙眼、木瓜、菠萝为主的热带亚热带作物基因组及其生物学性状研究,特别对甘蔗的基因组学及其重要性状的分子生物学进行了有系统的研究。先后主持863子课题、国家自然基金、福建省农技体系建设等研究项目11项;参与国家自然科学基金项目和农业部项目等项目10Nature GeneticsGenome ResearchGenome biologyCurrent Opinion in Plant BiologyPlant Cell&EnvironmentJournal of Experimental Botany等刊物上发表各类文章70多篇。

  

联系方式:

电子邮箱: zjisen@126.com;  zjisen@fafu.edu.cn

  

主要研究方向:

1)主要从事甘蔗基因组进化及其优异资源评价与利用、以及分子辅助育种技术等方面的研究。

2)甘蔗基因组剂量效应及杂种优势与生物量形成关系。

3)闽台区域特色经济物种的基因组学及其重要生物学性状;

  

学习经历:

1991-1997年:周宁县第一中学

1997-2001年:福建农林大学国家生物学理科基地 理学学士

2001-2004年:福建农林大学作物遗传育种学 农学硕士

2004-2007年:福建农林大学生物化学与分子生物学专业理学博士

2008 -2012年:美国伊利诺伊大学厄本那-香槟分校(UIUC)博士后

 

发表文章:(共发表各类论文70多篇,其中第一作者或通迅作者37篇)

1)Ching Man Wai,Jisen Zhang, Tyler C. Jones, Chifumi Nagai and Ray Ming. Cell wall metabolism and hexose allocation contribute to biomass accumulation in high yielding extreme segregants of a Saccharum interspecific F2 population.BMC Genomics.201718:773. https://doi.org/10.1186/s12864-017-4158-8.

2)Jiandong Bao, Meilian Chen, Zhenhui Zhong, Wei Tang, Lianyu Lin, Xingtan Zhang, Haolang Jiang, Deyu Zhang, Chenyong Miao, Haibao Tang, Jisen Zhang, Guodong Lu, Ray Ming, Justice Norvienyeku, Baohua Wang, Zonghua Wang. (2017)PacBio Sequencing Reveals Transposable Element as a Key Contributor to Genomic Plasticity and Virulence Variation in Magnaporthe oryzae.Molecular plant.DOI: doi.org/10.1016/j.molp.2017.08.008

3)Xiping Yang,Jian Song,Qian You,Dev R. Paudel,Jisen Zhang andJianping Wang*. (2017)Mining sequence variations in representative polyploid sugarcane germplasm accessions. BMC Genomics.18:594.DOI: 10.1186/s12864-017-3980-3.

4)Ching Man Wai, Robert VanBuren, Jisen Zhang, Lixian Huang, Wenjing Miao,Patrick Edger, Won Yim, Henry Priest, Blake Meyers, Todd C. Mockler, J. Andrew C. Smith, John Cushman, Ray Ming*. (2017)Temporal and spatial transcriptomic and microRNA dynamics of CAM photosynthesis in pineapple.The Plant Journal. DOI: 10.1111/tpj.13630.

5)Aijuan Xue, Zhen Li, Muchen Cai, Qing Zhang, Xingtan Zhang, Ray Ming, Jisen Zhang*(2017).Identification and Characterization of microRNAs from Saccharum officinarum by deep sequencing. Tropical Plant Biology.DOI: 10.1007/s12042-017-9190-y.*通讯作者).

6)Qing Zhang, Muchen Cai, Xiaomin Yu, Lishan Wang,Chunfang Guo, Ray Ming, and Jisen Zhang*(2017). Transcriptome dynamics of Camellia sinensis in response to continuous salinity and drought stress. Tree Genetics & Genomes.13:78. DOI: 10.1007/s11295-017-1161-9.*通讯作者).`

7)Liming Wang, Yuexia Zheng, Shihui Ding; Qing Zhang, Youqiang Chen, Jisen Zhang* (2017). Molecular cloning, structure, phylogeny and expression analysis of the invertase gene family in sugarcane. BMC Plant Biology. DOI:10.1186/s12870-017-1052-0.*通讯作者).`

8)Yihong Chen, Qing Zhang, Weichang Hu,Xingtan Zhang, Liming Wang, Xiuting Hua, Qingyi Yu, Ray Ming, Jisen Zhang.*(2017). Evolution and expression of the fructokinase gene family in Saccharum. BMC Genomics. DOI: 10.1186/s12864-017-3535-7.*通讯作者).

9)Han Jinlei, Masonbrink Rick, Shan Wenbo, Song Fengqin, Zhang Jisen, Yu, Weichang, Wang, Kunbo, Wu, Yufeng, Tang Haibao, Wendel Jonathan, Wang Kai* (2016). Rapid proliferation and nucleolar organizer targeting centromeric retrotransposons in cotton. The Plant Journal. doi: 10.1111/tpj.13309

10)VanBuren R., C. M. Wai, J. Zhang, J. Han, J. Arro, Z. Lin, Z. Liao, Q. Yu, M.-L. Wang, F. Zee, R. C. Moore, D. Charlesworth, R. Ming (2016). Extremely low nucleotide diversity in the X-linked region of papaya caused by a strong selective sweep. Genome Biology. doi: 10.1186/s13059-016-1095-9.

11)Jisen Zhang, Anupma Sharma, Qingyi Yu, Jianping Wang, Leiting Li, Lin Zhu, Xingtan Zhang, Youqiang Chen, Ray Ming (2016). Comparative structural analysis of Bru1 region homeologs in Saccharum spontaneum and S. officinarum. BMC Genomics. doi: 10.1186/s12864-016-2817-9

12)Jian Song, Xiping Yang, Marcio F. R. Resende Jr., Leandro Gomide Neves, James Todd, Jisen Zhang, Jack Comstock, Jianping Wang (2016). Natural allelic variations in highly polyploid Saccharum complex. Frontiers in Plant Science. doi: 10.3389/fpls.2016.00804

13)Qing ZhangWeichang Hu, Fan Zhu, Liming Wang, Qingyi Yu, Ray Ming, Jisen Zhang*(2016).Structure, Phylogeny, Allelic Haplotypes and Expression of Sucrose Transporter Gene Families in Saccharum. BMC Genomics. 17:88DOI: 10.1186/s12864-016-2419-6*通讯作者).`

14)Liwu Zhang,Ray Ming, Jisen Zhang, Aifen Tao, Pingping Fangand Jianmin Qi. (2015).De novo transcriptome sequence and identification of major bast-related genes involved in cellulose biosynthesis in jute (Corchorus capsularis L.). BMC Genomics. 15;16(1):1062. doi: 10.1186/s12864-015-2256-z.(影响因子3.99).

15)Ming Ray*...Jisen Zhang...et al. (2015) .The pineapple genome and the evolution of CAM photosynthesis. Nature Genetics . doi:10.1038/ng.3435) (排名11/70影响因子29.8)

16)Robert VanBuren*, Fanchang Zeng*, Cuixia Chen*, Jisen Zhang*, Ching Man Wai, Jennifer Han, Rishi Aryal, Andrea R. Gschwend, Jianping Wang, Jong-Kuk Na, Lixian Huang, Lingmao Zhang, Wenjing Miao, Jiqing Gou, Jie Arro, Romain Guyot, Richard C. Moore, Ming-Li Wang, Francis Zee, Deborah Charlesworth, Paul H. Moore, Qingyi Yu, Ray Ming (2015). Origin and domestication of papaya Yh chromosome. Genome Research, 25:524–533. doi: 10.1101/gr.183905.114. (*共同第一作者, 影响因子14.63)

17)Tang H, X Zhang, C Miao, J Zhang, R Ming, JC Schnable, PS Schnable, E Lyons, J Lu (2015).Robust scaffold ordering based on multiple maps. Genome Biology.16(1):3. doi:10.1186/s13059-014-0573-1.(影响因子10.5).

18)Jisen Zhang, Juan Liu., Ray. Ming. (2014). Genomic analysis of CAM plant pineapple. Journal of Experimental Botany. 65 (13):3395-3404. doi:10.1093/jxb/eru101 (影响因子5.52).

19)Jisen Zhang, Boualem A., Bendahmane A., Ray. Ming. (2014). Genomics of sex determination. Current Opinion in Plant Biology. 2014, 18:110–116. (影响因子7.85)

20)Jisen Zhang, Jie Arro, Youqiang Chen, Ray Ming ( 2013). Haplotype analysis of sucrose synthase gene family in three Saccharum species. BMC Genomics. 14:314.(影响因子3.99).

21)Jisen Zhang, Chifumi Nagai, Qingyi Yu, Yongbao. Pan, Tomas Ayala-Silva, Raymond Schnell, Jack Comstock, Aru Arumuganathan , Ray. Ming( 2012). Genome size variation in three Saccharum species. Euphytica. 185:511–519.(影响因子1.69).

22)Jisen Zhang, Z. Zhang, Y. Wu, L. Chen, Q. Luo, J. Chen, X. Huang, Y. Cheng, Z. Wang (2012). Regulatory Effect of Hypoxia-Inducible Factor-1α on hCG-Stimulated Endothelin-2 Expression in Granulosa Cells from the PMSG-Treated Rat OvaryJournal of Reproduction and Development. 678-684.(影响因子1.64).

23)Jingdong Sun*, Jisen Zhang*, Clayton LARUE, Steven Huber (2011). Decrease in leaf sucrose synthesis leads to increased leaf starch turnover and decreased RuBP regeneration-limited photosynthesis but not Rubisco-limited photosynthesis in Arabidopsis null mutants of SPSA1. Plant, Cell & Environment. 34, 592–604.*共同第一作者,影响因子6.96).

24)Lin Zhu, Jisen Zhang, Youqiang Chen, Hongyu Pan, Ray Ming. Identification and genes expression analysis of ATP-dependent phosphofructokinase family members among three Saccharum species. Function Plant Biology, 2013,40(4):369-378.SCI,影响因子2.9).

25)Haiping Xin, Jisen Zhang,Wei Zhu ,Nian Wang, Peige Fang, Yuepeng Han, Ray Ming, Shaohua Li. The effects of artificial selection on sugar metabolism and transporter genes in grape. Tree Genetics & Genomics. DOI 10.1007/s11295-013-0643-7SCI 2区,影响因子2.58).

26)Zhengchao Wang, Zhenghong Zhang, Yanqing Wu, Liyun Chen, Qianping Luo, Jisen Zhang, Jiajie Chen, Zimiao Luo, Xiaohong Huang, Yong Chen. Effects of Echinomycin on Endothelin-2 Expression and Ovulation in Immature Rats Primed with Gonadotropins. Experimental and Molecular Medicine, 2012, 31;44(10):615-21. doi: 10.3858/emm.2012.44.10.070.SCI,影响因子2.48).

27)Ming, R., R. VanBuren, Y. Liu, M. Yang, Y. Han, L.-T. Li, Q. Zhang, M.-J. Kim, M.C. Schatz, M. Campbell, J. Li, J.E. Bowers, H. Tang, E. Lyons, A.A. Ferguson, G. Narzisi, D.R. Nelson, C.E. Blaby-Haas, A.R. Gschwend, Y. Jiao, J.P. Der, F. Zeng, J. Han, X. Min, K.A. Hudson, R. Singh, A.K.Grennan, S.J. Karpowicz, J.R. Watling, K. Ito, S.A. Robinson, M.E. Hudson, Q. Yu, T.C. Mockler, A. Carroll, Y. Zheng, R. Sunkar, R. Jia, N. Chen, J. Arro, C.M. Wai, A. Spence, Y. Han, L. Xu, J. Zhang, R. Peery, M.J. Haus, W. Xiong., J.A. Walsh, J. Wu, M.-L. Wang, Y.J. Zhu, R.E. Paull, A.B. Britt, C. Du, S.R. Downie, M.A. Schuler, T.P. Michael, S.P. Long, D.R. Ort, J.W. Schopf, D.R. Gang, N. Jiang, M. Yandell, C.W. dePamphilis, S.S. Merchant, A.H. Paterson, B.B. Buchanan, S. Li, J. Shen-Miller. 2013. Genome of the long-living Sacred lotus (Nelumbo nucifera Gaertn.) Genome Biology 14: R41.(影响因子10.03).

28)Youxiong Que, Jianwei Lin, Jisen Zhang, Miaohong Ruan, Liping Xu, Muqing Zhang.Molecular cloning and characterization of a non-TIR-NBS-LRR disease resistance gene analogue from sugarcane. Sugar Tech (2008) 10: 71. doi:10.1007/s12355-008-0012-2.

29)李珍,华秀婷,张积森*.高等植物WRKY转录因子家族的演化及功能研究综述.热带作物学报,2017, (*通讯作者)

30)沈姣,王凯,张文盼,董广蕊,石岩,张积森*.甘蔗染色体研究近况.热带作物学报,2016,37(7):1430-1436. ( *通讯作者)

31)张清,胡伟长,张积森.*植物蔗糖转运蛋白研究进展.热带作物学报.2016,37(01): 1-11.( *通讯作者)

32)陈毅鸿,张积森*.植物果糖激酶基因家族演化及其功能.分子植物育种.2016, 14,(2), 359-369

33)池福铃,王丽珊,陈兰平,张清,陈由强,张积森*.甘蔗纤维素合成酶家族的基因组演化.北京:中国科技论文在线. [2015-01-29].http://www.paper.edu.cn/releasepaper/content/ 201501-504. ( *通讯作者)

34)王丽珊林清凡陈兰平池福铃郭春芳张积森.茶树P5CS基因克隆及其在渗透和高盐胁迫下的表达分析.热带作物学报.2015,36(1): 68-75

35)陈兰平,陈由强,方静平,宋喜梅,叶冰莹,陈如凯,张积森*.甘蔗SPS 基因家族成员表达与糖分积累关系解析,热带作物学报.2014357): 1354-1361.( *通讯作者)

36)张积森;郑月霞;邹丽娟;叶冰莹;陈如凯;陈由强.酵母单杂交方法步鉴定甘蔗SPSⅢ启动子调控序列.农业生物技术学报. 2012, 20(11): 1282~1290

37)张积森,郑月霞,方静平,高玉娜,郭春芳,叶冰莹,陈由强,陈如凯.甘蔗SPSIII基因启动子5侧翼的GUS表达载体构建.福建教育学院学报.2012(3): 118-121.

38)张积森,林清凡,方静平,邹丽娟,叶冰莹,陈由强,陈如凯.甘蔗SPS III启动子区ATCT-motifCAT-box元件的酵母单杂交报告载体构建.福建师范大学学报(自然科学版). 2013, 29(1).

39)许玉林,郑月霞,叶冰莹,张积森,陈由强.一株纤维素降解真菌的筛选及鉴定. 微生物学通报.2013, 40(2): 220-227.

40)郑月霞,许玉林,张积森,叶冰莹,陈由强,陈如凯.甘蔗可溶性酸性转化酶基因的克隆及序列分析. 热带作物学报,  2012,  33(11): 2007-2011.

41)江安庆,苏轶,郑月霞,张积森,叶冰莹,陈由强. 植物蔗糖转运蛋白的研究进展.安徽农业科学.2011.39(34). 20938-2094020974

42)魏芳,林燕环,叶冰莹,张积森,陈由强.甘蔗根际土壤产木聚糖酶菌株的筛选及鉴定. 亚热带农业研究.2011.7( 3).201-205.

43)林燕环,魏芳,叶冰莹,张积森,陈由强.酿酒酵母ADH2基因沉默表达载体的构建. 亚热带农业研究.2011.7( 3).197-200.

44)苏轶,江安庆,逯平杰,张积森,叶冰莹,陈由强.超声辅助萃取HPLC法测定烟草中蔗糖、果糖、葡萄糖含量.安徽农业科学.2011.39(24). 14988-14989,14992.

45)吴自明,江安庆,张积森,叶冰莹,陈由强 .甘蔗ShSUT4基因及其5’侧翼序列的克隆与序列分析.亚热带农业研究.2012. (2)126-130.

46)胡巍,张积森,叶冰莹,陈由强,陈如凯. 甘蔗蔗糖磷酸合成酶磷酸化位点的突变及相应表达载体的构建.亚热带农业研究.2010. 6(4).77-80

47)张积森郭春芳,王冰梅,张木清,陈由强,陈如凯.甘蔗一个水分胁迫响应相关的醛脱氢酶基因克隆及其表达特征分析.中国农业科学.2009,42(8):2676-2685.

48)刘文荣*张积森*,饶进,蔡秋华,翁笑艳,阮妙鸿,阙友雄,陈如凯,张木清.干旱胁迫下斑茅消减文库的构建及分析,作物学报(*共同第一作者)2007,33(6):961-967.

49)张积森,李伟,阙友雄,阮妙鸿,张木清,陈如凯.斑茅两个看家基因片段的克隆及其在基因芯片中的应用.热带亚热带植物学报,2007153):277-283.

50)张积森,李伟,阮妙鸿,阙友雄,陈如凯,张木清. Cloning of aco from Erianthus arundinaceus and its expression under water-stress(英文稿).热带作物学报. 2007,28(2):60-68.

51)张积森,阙友雄,李伟,阮妙鸿,张木清,陈如凯.水分胁迫下斑茅3个逆境代谢相关基因表达的实时PCR 分析.中国农学通报.2007, 5(23):49-54.

52)张积森、廖辉煌、林晓坤、陈如凯、张木清拟南芥rd29A 启动子的克隆及其在甘蔗抗逆转基因中的应用初探.中国科协第四届优秀博士生学术年会论文集:117-123,中国科学出版社.

53)张积森,黄金存,叶冰莹,陈由强,陈如凯.应用SMART 技术构建甘蔗叶片全长cDNA 文库,热带作物学报,2008,29(6):684-689

54)张积森,黄金存, 叶冰莹,陈由强,陈如凯.甘蔗ADP/ATP 转运蛋白酶基因克隆及其序列的生物信息学分析.中国农学通报,2009, 25(20):49-53

55)张积森,陈由强,郭春芳,李伟,阙友雄,叶冰莹,陈如凯,张木清.甘蔗水分胁迫响应的δ-鸟氨酸转氨酶基因克隆及分子特征分析[J].热带作物学报,2009,30(8):1062~1068.

56)张积森,陈由强,李伟,阙友雄,叶冰莹,陈如凯,张木清.甘蔗1-吡咯啉-5-羧酸合成酶基因(P5CS)的克隆及其表达分析[J].热带作物学报,2009,30(9):1337~1344.

57)何炜,叶冰莹, 周平,郑钊,张积森,何文锦,林荣华, 陈由强,陈如凯.甘蔗果糖-6-磷酸,2-激酶/果糖-26-二磷酸酶基因的cDNA 克隆及序列分析. 福建师范大学学报. 2009,25(3): 109-113.

58)王冰梅; 张积森;黄庆煌; 叶冰莹; 陈如凯; 陈由强.马尾松银松素合酶基因转化双子叶植物表达载体的构建及鉴定. 福建师范大学学报. 2008 .24 (6)

59)Youxiong QueJianwei Lin,Jisen Zhang, etc..Cloning and analysis of NBS class disease resistance gene analogous in sugarcane. PROC.Internl.Symp. on Technologies to Improve Sugar Productivity in Developing Countries, Gulin, P.R.China,pp 623-628(2006).

60)阙友雄,许莉萍,张木清,徐景升,张积森,陈如凯.甘蔗中一个NBS-LRR 类基因的全长克隆与表达分析,作物学报.2009, 35(6): 1161−1166

61)阙友雄,许莉萍,徐景升,张积森,张木清,陈如凯.甘蔗基因表达定量PCR 分析中内参基因的选择.热带作物学报.2009.303:274-278.

62)阙友雄,许莉萍,林剑伟,徐景升,张积森,张木清,陈如凯.利用斑茅cDNA 芯片研究甘蔗受黑穗病菌侵染后基因差异表达.作物学报2009, 35(5) 940-945

63)曹罗元,叶冰莹,张积森,陈由强,陈如凯. Cre/loxP系统介导删除酿酒酵母ALD_4基因研究.中国酿造,200903.20-23.

64)阮妙鸿, 许燕,郑瑶,杨川毓, 张积森,阙友雄,陈如凯,张木清.ScMV-CP 基因甘蔗对土壤微生物的影响.热带作物学报2008 02

65)郭春芳张积森张木清陈如凯.外源ABA和乙烯利胁迫下斑茅ACO基因表达的实时PCR分析. 中国农学通报, 2008(2): 48-52.

66)蔡秋华张积森刘文荣饶进翁笑艳陈如凯张木清.斑茅SAMDC 基因的克隆及其原核表达分析.福建稻麥科技. Vol.27 No.1 (2009/03). 17-20.

67)连玲叶冰莹何炜张积森何文锦陈由强陈如凯. 甘蔗UGPasecDNA 的克隆及序列分析. 福建师范大学学报(自然科学版).2009(3):105-109.

68)翁笑艳阮妙鸿张积森郭春芳郭莺张木清.水分胁迫下Ca2+与甘蔗内源ABA的关系.武夷科学. 2007(23):1-5.

69)蔡秋华张积森郭春芳等.高等植物体内多胺的生理功能及其分子生物学研究进展. 福建教育学院学报.2006 ,10

70)林荔辉,陈志伟,张积森,吴为人,周元昌,唐定中,利用回交和MAS 技术改良珍汕97B 的白叶枯病抗性. 福建农林大学学报(自然科学版). 2004 Vol.33 No.3 P.280-283.

  

著作:

71)张积森,王正朝。遗传连锁构图.第二十章:291-302. 王正朝,潘晓燕《高级生理学进展》(英文),河南科学技术出版社,郑州,2015年,ISBN: 978-7-5349-7238-6.

Jisen Zhangand Zhengchao Wang. Genetic Linkage Mapping Chapter 20,291-302 Wang ZC and Pan XY (Editors), Progress in Senior Physiology, Henan Science and Technology Press, Zhengzhou, 2015, ISBN: 978-7-5349-7238-6.

72)Jisen Zhang, Marvellous Zhou, James Walsh, Lin Zhu, Youqiang Chen, Ray Ming. Chapter 23: Sugarcane Genetics and Genomics. Physiology, Biochemistry, and Functional Biology of Sugarcane, First Edition. Edited by Paul H. Moore and Frederik C. Botha . 623-644. Published 2013 by John Wiley & Sons, Inc.Book Chapter

  

会议论文

73)Jisen Zhang, Ray Ming. Haplotype Analysis ofThe SuSy Gene Family In Three SaccharumSpecies.

(http://www.intl-pag.org/19/abstracts/W47_PAGXIX_318.html(2010 PAG 会议论文摘要)

74)叶冰莹, 陈由强, 黄金存,周平,张积森.甘蔗果糖-16-二磷酸酯酶的cDNA 克隆及序列分析,中国植物学会七十五周年年会(2008年会议论文)

75)陈由强,叶冰莹, 周平, 黄金存,张积森.甘蔗蔗糖磷酸合成酶基因表达及转录调控机制的研究.中国植物学会七十五周年年会(2008年会议论文)

76)张积森,张木清,郭春芳, 陈由强,叶冰莹,陈如凯.甘蔗脯氨酸代谢两个关键酶基因的克隆及表达分析,中国植物学会七十五周年年会(2008年会议论文)

77)Jisen Zhang,Qiong Zhang, Lei-Ting Li , Ray Ming. Recent Polyploidization and Genome Evolution in Saccharum(2013PAG会议报告https://pag.confex.com/pag/xxi/webprogram/Paper5287.html